What Are the Different Types of Payroll Audits?

Typically, payroll audits fall into a few common categories. One of the most frequent types is the wage and tax reconciliation audit—where agencies compare the wages reported on W-2 forms with the tax filings submitted on IRS Form 941. If discrepancies arise, the agency will request clarification or corrections. These audits usually don’t require an in-person meeting; you simply respond to a letter with the requested information. State agencies, like Virginia’s Employment Commission, also conduct audits to verify that all employees are properly classified and wages are accurately reported.

Another important category of audits are done by the Department of Labor, which focus on wage and hour compliance. These audits verify that employees receive proper payment for overtime and hours worked, and employee complaints or random agency reviews often trigger them. Additionally, benefit plan audits, such as those for 401(k) plans, check that your retirement and health plans comply with federal regulations.

It’s also worth noting that many states conduct random audits to confirm compliance with local employment laws. These audits look for things like unreported casual labor or misclassified contractors. While the idea of an audit can be unsettling, it’s important to remember that agencies are simply doing their job to uphold regulations!

Here are a few key things auditors typically review:

  • Payroll records, including timesheets and pay stubs.

  • Tax filings and wage reports (W-2s, 941s, state filings).

  • Employee classifications and benefit plan documentation.

At MoneyWise Payroll, we help you stay audit-ready by maintaining accurate records and ensuring your payroll data is consistent across all reports. If an audit notice does arrive, our team is ready to guide you through the process so that you can respond quickly and minimize any potential issues.